To run FASTA programs locally for high-throughput analysis, you should download the official distribution from the UVA FASTA Downloads page. UVA FASTA Downloads
The FASTA software package is a cornerstone of bioinformatics, used for searching protein and DNA sequence databases to find regions of similarity. Developed by William Pearson and David Lipman, the package introduced the ubiquitous FASTA file format that has become the industry standard for representing biological sequences. Downloading the FASTA Software Package fasta software download