You can find the most recent pre-compiled JAR files under the JuicerTools Releases page on GitHub .
juicer_tools.jar serves as a multi-functional toolkit. It is primarily used to create and analyze .hic files, which are binary formats designed for rapid random access to genomic contact matrices. Core Functions: Releases · aidenlab/JuicerTools - GitHub juicer_tools.jar download
If you are using the full Juicer pipeline, the JAR is typically included in the scripts directory or linked as juicer_tools.jar for automated processing. Key Capabilities and Usage You can find the most recent pre-compiled JAR
juicer_tools.jar is the cornerstone of the Juicer software suite, a powerful, one-click system for analyzing loop-resolution Hi-C experiments. This Java-based executable is essential for bioinformaticians and researchers working on 3D genomics, providing the command-line tools needed to transform raw interaction data into highly compressed .hic files and perform complex downstream feature annotations. Where to Download Juicer Tools Core Functions: Releases · aidenlab/JuicerTools - GitHub If