When you download the store version of Vim (specifically GVim or MacVim), you unlock features that the standard terminal version sometimes lacks:
Easier rendering of specialized coding fonts like Fira Code or JetBrains Mono. Is the "Store App" Different from the Terminal?
Run sudo snap install vim-editor to get a containerized version.
Easily copy and paste between Vim and your browser.
Essentially, no. Whether you download it from a store or a terminal, the core engine is the same. The store app usually just adds a "GUI wrapper" (GVim) around the engine. You still use :w to save, :q to quit, and i to enter Insert Mode.